That is an enormous sized canvas. 6400 x 6400 x 4 bytes per pixel is 156 MB, and your implementation may need to allocate two or more buffers of that size, for double buffering, or need to allocate video memory of that size as well. It's going to take a while to allocate and clear all that memory, and you may not be guaranteed to succeed at such an allocation. Is there a reason you need such an enormous canvas? You could instead try sizing your canvas to be only as large as necessary to draw the line between those two divs, or you could try using SVG instead of a canvas.
Another possibility would be to try dividing your canvas up into large tiles, and only rendering those tiles that are actually visible on the screen. Google Maps does this with images, to only load images for the portion of the map that is currently visible (plus some extra one each side of the screen to make sure that when you scroll you won't need to wait for it to render), maintaining an illusion that there is an enormous canvas while really only rendering something a bit bigger than the window.