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I'm trying to figure out the easiest and most secure way to Authenticode sign binaries in one of my projects.

The easiest way I can see to do this is to grab the result of compilation--a completed install package containing all my binaries--extract the assemblies from it, sign them, then repack these signed assemblies in the MSI which then gets signed.

Lots of information out there about unpacking files from an MSI, but nothing about re-packing them. How can I do it?