We have a number of servers running various different LAMP setups. One thing that seems to be different depending on who set the server up is the way PHP is configured. Some are set up to use the Apache DSO module, others are setup to use CGI. Some have suEXEC turned on, other servers its turned off. We are always trying to tweak our apps for performance but i'm not sure what gains there are to be had at this level.
If it helps a standard setup for our server is something like this:
- PHP 5.2.8
- MySQL 5.0.81
- Apache 2.2.11
Thanks.