I am building a project with similar setup (ZF 1.10 + Doctrine2) and I've used dependency injection to deal with this situation, much like takeshin said. Here goes full project repository URL: https://bitbucket.org/phpfour/zf-doctrine2. Below are some code excerpts.
Here's my controller:
<?php
require_once APPLICATION_PATH . "/models/PostManager.php";
class IndexController extends Zend_Controller_Action
{
private $_em;
public function init()
{
$this->_em = $this->getInvokeArg('bootstrap')->getResource('doctrine');
}
public function indexAction()
{
$pm = new PostManager($this->_em);
$this->view->posts = $pm->getPublicPosts();
}
My entity manager (or service class):
<?php
class PostManager
{
protected $_em;
public function __construct(Doctrine\ORM\EntityManager $em)
{
$this->_em = $em;
}
public function getPublicPosts()
{
$query = $this->_em->createQuery('SELECT p FROM Entities\Post p WHERE p.visible = true');
$posts = $query->getResult();
return $posts;
}
Hope this helps!