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109

answers:

1

Still struggling with R and then in particular with errorhandling:

If I use:

result<-try(sqlSave(ch,df,tablename="tblTest"))

I can use:

if (class(result) != "try-error")

to check if somenthing went wrong. No problem.

But if I use try in combination with a function it doesn't work as I expected:

 result <- try(ch<-odbcConnect("TEST"))

gives "-1" for result and "integer" for class(result)

So should I use

ch<-odbcConnect("TEST")
if (ch != -1)

and use geterrmessage() for the error message?

+4  A: 

If you read closely error message you could see that odbcConnect gives you warning. Error is generated by ODBC drivers and it isn't error in try meaning (geterrmessage() won't work either).

You could use tryCatch to handle this, e.g.:

tryCatch(odbcConnect("TEST"), warning=function(w) print("FAIL!"))

Some more explanation:
-1 is a result of odbcDriverConnect function. If you look at the code there are lines

stat <- .Call(C_RODBCDriverConnect, as.character(connection), 
        id, as.integer(believeNRows), as.logical(readOnlyOptimize))
if (stat < 0L) {
     warning("ODBC connection failed")
     return(stat)
}

So you end without errors (and with a warning) and with integer code from C-level. Actually this code is returned when connection is succeed too (but then is equal 1). When there is no errors then result class can't be try-error.
It is not problem with try and functions but specific of this particular function (odbcDriverConnect).

You could of course use this behaviour as in your example

ch <- odbcConnect("TEST")
if (ch != -1)

With tryCatch you could do

tryCatch(ch<-odbcConnect("TEST"), warning=function(w) print("FAIL!"))

which creates ch variable when succeed and print message when failed.
Or

ch <- tryCatch(odbcConnect("TEST"), warning=function(w) {print("FAIL!");return(NA)})

which always creates ch variable but in case of failure there is NA value.

Marek
But still I don't understand why class(result) give "integer" with a function call and otherwise "try-error".And where do I store the channel variable of odbcConnect in your example?
waanders
Thanks for the additions and the clear explanation
waanders
Just one question: Why doesn't -- df <- tryCatch(sqlQuery(ch,paste("SELECT * FROM tblTest")), warning=function(w) {print("FAIL!");return(NA)}) -- work the same? I don't get a printed warning and "df" contains the error message not a "NA" value
waanders
Cause in case of error you should write function to handle it. So you should do: `df <- tryCatch(sqlQuery(ch,paste("SELECT * FROM tblTest")),warning=function(w) {print("FAIL! (warning)");return(NA)},error=function(e) {print("FAIL! (error)");return(NA)})`
Marek
Still no printed error message. Something to do with "options" or something?
waanders
Change `error` function to print message if you want this: `error=function(e) {print(geterrormessage());print("FAIL! (error)");return(NA)}`.
Marek
Should be `geterrmessage()`
waanders
I've now two pieces of code: `ch <- tryCatch(odbcConnect("TEST"), warning=function(w) {print("FAIL! (warning)");return(NA)}, error=function(e) {print(paste("ERROR:",geterrmessage()));return(NA)})`and`df <- tryCatch(sqlQuery(ch,"SELECT * FROM tblTest"), warning=function(w) {print("FAIL! (warning)");return(NA)}, error=function(e) {print(paste("ERROR:",geterrmessage()));return(NA)})`. odbcConnect works fine with errors and warnings, sqlQuery only with errors :-(
waanders
Anybody a suggestion?
waanders
I'll ask a separate question about this
waanders
http://stackoverflow.com/questions/3501528/rodbc-functions-and-errors-warnings
waanders