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We have the scenario to pass the XML file as input to the applications and validate the schema and transactions, Is there any FitNesse fixture framework available to simulate this?

A: 

There isn't a pre-defined fixture available but you can write your own, e.g., based on Do Fixture, something like:

|myXmlFixture|
|set schema file|xxx|
|validate xml file|yyy|
Mike Stockdale