Essentially, accessing the file system is a big no-no when unit testing. For starters, these tests are slow(er) than your in-system tests, thus reducing the likelihood of you running your tests at a high frequency (such as with every compilation).
Much better if you use an adapter-pattern to abstract away the access to the file system. I'm a .NET developer so my example will be in C#, but I expect you to be able to translate it simply enough:
public class MyManager
{
private readonly IFileAdapter _fileAdapter;
public MyManager(IFileAdapter fileAdapter)
{
_fileAdapter = fileAdapter;
}
}
public interface IFileAdapter
{
public FileStream Open(string fileName);
public string ReadLine(FileStream fileStream);
// More methods...
}
public class FileAdapter : IFileAdapter
{
public FileStream Open(string fileName)
{
return System.Io.File.Open(fileName);
}
public string ReadLine(FileStream fileStream)
{
return File.Open(fileStream);
}
}
Now, as usual, you can mock the file system, as you would any other class, supplying the returned results. Remember - you are not testing Java's IO classes it is assumed that they work. You are only testing your classes (i.e. MyManager, in the example above).
Leave the tests that actually use the file system to your integration / acceptance tests.
Hope this helps,
Assaf.