I have experienced the same problem, and while I don't have a solution, I can tell you how I work around the problem.
Because of how formatting works, I deliberately avoid lines of code that are excessively long. In general, when I keep lines short, it makes better decisions as to how to format the code. This can even work with SQL statements, for example:
public static final String SELECT_SOMETHING = "SELECT"
+ "OBJECTID, THIS, THAT, THEOTHER, THING"
+ " FROM DBNAME.DBSCHEMA.TABLE_T"
+ " WHERE ID = ?";
This statement formats reasonably, because where possible items were split apart and concatenated together. When I don't do this, I get unpredictable results:
public static final String SELECT_SOMETHING = "SELECT OBJECTID, SOMETHING FROM DBNAME.DBSCHEMA.TABLE_T WHERE ID = ?";
For comments, I place them all on a single line when possible, and allow it to word wrap when it does the formatting.
Also, it is possible to change the style using the code formatter to make things work better for your coding style. You may want everyone on the team to use the same format, just to avoid conflicts. Because it is easier to compare changes with other developers, or prior versions using your source control tool, even if it makes parts of your code less readable, using the formatter has still been to my advantage.
Still, I understand your frustration when the formatter makes bad decisions!