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39

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2

hello , i am new to python , and I want to extract the data from this format

FBpp0143497 5 151 5 157 PF00339.22 Arrestin_N Domain 1 135 149 83.4 1.1e-23 1 CL0135
FBpp0143497 183 323 183 324 PF02752.15 Arrestin_C Domain 1 137 138 58.5 6e-16 1 CL0135
FBpp0131987 60 280 51 280 PF00089.19 Trypsin Domain 14 219 219 127.7 3.7e-37 1 CL0124

to this format

FBpp0143497

5 151 Arrestin_N 1.1e-23

FBpp0143497

183 323 Arrestin_C 6e-16

+1  A: 

You could parse the file with the 'csv' module, using space as a delimiter. See the documentation for csv.reader

Marco Mariani
+1  A: 

As this is proteomic data, probably you could find dedicated parsers in the BioPython package

joaquin