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I'm interested if there are libraries in java, that render voxel-based sceneries? Open-Source is preferred, as always.

+2  A: 

There were some attempts to support Voxels with the now late J3D. Here are some examples

There was also a project from university of Iowa a few years ago, called VolumeJ, but that project is fairly old.

Finally, there were a recent academic survey about these frameworks, I am sure that there is a free PDF somewhere.

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