Use () and \x. A naive example that assumes the text within the tokens is always delimited by #:
text (#+.+#+) text text (#+.+#+) text text
The stuff in the () can then be grabbed by using \1 and \2 (\1 for the first set, \2 for the second in the replacement expression (assuming you're doing a search/replace in an editor). For example, the replacement expression could be:
token1: \1, token2: \2
For the above example, that should produce:
token1: ###token1###, token2: ###token2###
If you're using a regexp library in a program, you'd presumably call a function to get at the contents first and second token, which you've indicated with the ()s around them.