There is a utility that comes with boost called bcp, that can scan your source and extract any boost header files that are used from the boost source. I've setup a script that does this extraction into our source tree, so that we can package the source that we need along with our code. It will also copy the boost source files for a couple of boost libraries that we use that are no header only, which are then compiled directly into our applications. This makes it easy to rerun the script whenever there is a new version of boost released.
For reference, here is what we use
#!/bin/sh
BOOST_SRC=.../boost_1_43_0
DEST_DIR=../src/boost
TOOLSET=
if ( test uname
= "Darwin") then
TOOLSET="--toolset=darwin"
fi
# make bcp if necessary
if ( ! test -x $BOOST_SRC/dist/bin/bcp ) then
if ( test -x $BOOST_SRC/tools/jam/*/bin.*/bjam ) then
BJAM=$BOOST_SRC/tools/jam/*/bin.*/bjam
else
echo "### Building bjam"
pushd $BOOST_SRC/tools/jam
./build_dist.sh
popd
if ( test -x $BOOST_SRC/tools/jam/*/bin.*/bjam ) then
BJAM=$BOOST_SRC/tools/jam/*/bin.*/bjam
fi
fi
echo "BJAM: $BJAM"
pushd $BOOST_SRC/tools/bcp
echo "### Building bcp"
echo "$BJAM $TOOLSET"
$BJAM $TOOLSET
if [ $? == "0" ]; then
exit 1;
fi
popd
fi
if ( ! test -x $BOOST_SRC/dist/bin/bcp) then
echo "### Couldn't find bpc"
exit 1;
fi
mkdir -p $DEST_DIR
echo "### Copying boost source"
MAKEFILEAM=$DEST_DIR/libs/Makefile.am
rm $MAKEFILEAM
# copy source libraries
mkdir -p $DEST_DIR/libs/signals/src
cp $BOOST_SRC/libs/signals/src/* $DEST_DIR/libs/signals/src/.
echo -n "boost_sources += " >> $MAKEFILEAM
for f in `ls $DEST_DIR/libs/signals/src | fgrep .cpp`; do
echo -n "boost/libs/signals/src/$f " >> $MAKEFILEAM
done
echo >> $MAKEFILEAM
echo "### Extracting boost includes"
$BOOST_SRC/dist/bin/bcp --scan --boost=$BOOST_SRC ../src/*/*.[Ch] $DEST_DIR
if [ $? != "0" ]; then
echo "### bcp failed"
rm -rf $DEST_DIR
exit 1;
fi