Item 2 of the Joel Test is "Can you make a build in one step", but what is the best (or commonly accepted) way to achieve this? What are the pros and cons of using the IDE's command-line interface to do a headless build, as opposed to maintaining a build script that is completely independent of the IDE (e.g. using Ant or Maven in the case of a Java project).
I ask this question because I am experimenting with Maven, and was a bit surprised to find that even when using the m2eclipse plugin it's not really feasible to turn off Eclipse's Java Builder and delegate the whole build process to Maven while working on the project. It seems that if I want to migrate the project to Maven, I'll end up having to maintain two equivalent but different build processes, for example the command-line build will use the DataNucleus Maven plugin for enhancing JDO classes, while the IDE build will use the DataNuclues plugin for Eclipse; the command-line build will use the Tomcat Maven plugin, while the IDE will use Eclipse's web tools platform. This redundancy seems unfortunate.
I gather that NetBeans uses Ant for its build, which sounds like it would solve this problem. But unfortunately I'm using neither NetBeans nor Ant!
EDITED TO ADD: I found that I can set up a Maven builder in Eclipse with specific goals that call some of the Maven plugins that I'm using (e.g. in my case the goals "datanucleus:enhance process-resources" take care of JDO enhancement, resource copying, and native2ascii conversion). This leaves java compilation up to Eclipse, but still achieves some degree of integration with Maven.