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When I loaded package debug to debug a script with zoo objects, I got trouble: function index from zoo got masked by debug package. How can I unmask index? In general, how to deal with these name colliding problems? We just do not use debug package with `zoo'?

+3  A: 

Exported symbols are always identifiable with the :: operator:

zoo::index

Hidden functions not declared in the namespace can still be accessed using ::: (triple-colon), and example would be

zoo:::.onLoad

which you can see even though it is not exported.

Dirk Eddelbuettel
On the other hand this is the reason why setting system<-function(){} does not magically make R secure.
mbq
thanks. I can temperarily set index<-zoo::index to work around this problem without changing my original script. It seems some packages just do not work together.
ahala
+2  A: 

Its only masked to you but its not masked to zoo so when a zoo function tries to use index it will still find its own index first.

zoo also has a time.zoo method so if z is a zoo object you can use time(z) in place of index(z).

Finally you can always refer to zoo::index to make sure you get the one in zoo.

G. Grothendieck
thanks. time.zoo will work but I dont want to change my original script. And index(zooobject) reports error in my case. Apperently R doesnot know index.zoo should be called on zooobject.
ahala
If you load zoo after loading debug/mvbutils rather than the other way around then the index in zoo will be the one you get by default rather than the one in debug/mvbutils.
G. Grothendieck