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Active directories having problem

We are on a domain and we have an active directory implementation on our network. Now, we have expanded our network and added a back up domain controller on the network. Now, all the machines and user profiles are actually fetching their data from a DFS share instead of Domain controller itself.

So we had to change all the configuration and Group policies to redirect the folders to DFS share instead of the primary domain controller.

After changing that we did GPUpdate on both domain controllers and client machines and restarted the client machines,

Still few of the user profiles are acting very weirdly. Some of the user profile have Desktop mapped to primary domain controller while My documents is mapped to DFS. I am not sure how is that possible and why it is happening.

I am attaching the network topology for your reference. Please check.

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