If someone is purposely trying to modify two files to have the same hash, what are ways to stop them? Can md5 and sha1 prevent the majority case?
I was thinking of writing my own and I figure even if I don't do a good job if the user doesn't know my hash he may not be able to fool mine.
What's the best way to prevent this?
MD5 is generally considered insecure if hash collisions are a major concern. SHA1 is likewise no longer considered acceptable by the US government. There is a competition under way to find a replacement hash algorithm, but the recommendation at the moment is to use the SHA2 family - SHA-256, SHA-384 or SHA-512.
You can try to create your own hash - it would probably not be as good as MD5, and 'security through obscurity' is likewise not advisable.
If you want security, hash with multiple hash algorithms. Being able to simultaneously create files that have hash collisions using a number of algorithms is excessively improbable. [And, in the light of comments, let me make it clear: I mean publish both the SHA-256 and the Whirlpool values for the file - not combining hash algorithms to create a single value, but using separate algorithms to create separate values. Generally, a corrupted file will fail to match any of the algorithms; if, perchance, someone has managed to create a collision value using one algorithm, the chance of also producing a second collision in one of the other algorithms is negligible.]
The Public TimeStamp uses an array of algorithms. See, for example, sqlcmd-86.00.tgz for an illustration.
Why are you trying to create your own hash algorithm? What's wrong with SHA1HMAC?
Yes, there are repeats for hashes.
Any hash that is shorter than the plaintext is necessarily less information. That means there will be some repeats. The key for hashes is that the repeats are hard to reverse-engineer.
Consider CRC32 - commonly used as a hash. It's a 32-bit quantity. Because there are more than 2^32 messages in the universe, then there will be repeats with CRC32. The same idea applies to other hashes.
This is called a "hash collision", and the best way to avoid it is to use a strong hash function. MD5 is relatively easy to artificially build colliding files, as seen here. Similarly, it's known there is a relatively efficient method for computing colliding SH1 files, although in this case "relatively efficient" still takes hunreds of hours of compute time.
Generally, MD5 and SHA1 are still expensive to crack, but not impossible. If you're really worried about it, use a stronger hash function, like SHA256.
Writing your own isn't actually a good idea unless you're a pretty expert cryptographer. most of the simple ideas have been tried and there are well-known attacks against them.
If you really want to learn more about it, have a look at Schneier's Applied Cryptography.
I don't think coming up with your own hash algorithm is a good choice.
Another good option is used Salted MD5. For example, the input to your MD5 hash function is appended with string "acidzom!@#" before passing to MD5 function.
There is also a good reading at Slashdot.
If the user doesn't know your hashing algorithm he also can't verify your signature on a document that you actually signed.
The best option is to use public-key one-way hashing algorithms that generate the longest hash. SHA-256 creates a 256-bit hash, so a forger would have to try 2255 different documents (on average) before they created one that matched a given document, which is pretty secure. If that's still not secure enough for you, there's SHA-512.
Also, I think it's worth mentioning that a good low-tech way to protect yourself against forged digitally-signed documents is to simply keep a copy of anything you sign. That way, if it comes down to a dispute, you can show that the original document you signed was altered.
There is a hierarchy of difficulty (for an attacker) here. It is easier to find two files with the same hash than to generate one to match a given hash, and easier to do the later if you don't have to respect form/content/lengths restrictions.
Thus, if it is possible to use a well defined document structure and lengths, you can make an attackers life a bit harder no matter what underling hash you use.