I don't see a declaration for "stop2" anywhere in your code...
Looks to me like you're confused about how to treat angles. Are you using a [0, 360] scale for a full circle or [-180, +180]? I see a check against 270 in your code, but your prose mentions -90. Yes, they're "the same", but if it's not working perhaps some confusion has crept into your code.
If you're going with [-180, +180], with zero degrees as the neutral position for your robot arm, perhaps you can take advantage of symmetry and use the absolute value function. You only have to code it once that way. If it's successful for [0, +90] it'll also work for [-90, 0] as well.
It also seems to me that you're not taking advantage of object-oriented thinking. This method has motion and timing and graphical refresh all in the same method. Writing smaller methods and unit testing each one to be sure that it works is a better approach. It's called "decomposition". The moment you say "it's a big method", it suggests to me that perhaps it's too big and needs to be refactored.